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1

Relaxation Runge--Kutta Methods: Fully Discrete Explicit Entropy-Stable Schemes for the Compressible Euler and Navier--Stokes Equations

Ranocha, Hendrik, Sayyari, Mohammed, Dalcin, Lisandro, Parsani, Matteo, Ketcheson, David I.

Journal:

SIAM Journal on Scientific Computing

Year:

2020

Language:

english

File:

PDF, 8.71 MB

english, 2020

2

Roles of cell wall peroxidases in plant development

Francoz, Edith, Ranocha, Philippe, Nguyen-Kim, Huan, Jamet, Elisabeth, Burlat, Vincent, Dunand, Christophe

Journal:

Year:

2015

Language:

english

File:

PDF, 1.11 MB

english, 2015

3

On the robustness and performance of entropy stable collocated discontinuous Galerkin methods

Rojas, Diego, Boukharfane, Radouan, Dalcin, Lisandro, Del Rey FernÃ¡ndez, David C., Ranocha, Hendrik, Keyes, David E., Parsani, Matteo

Journal:

Journal of Computational Physics

Year:

2020

File:

PDF, 15.39 MB

2020

4

Dynamical features and spatial structures of the plasma interaction region of 67P/Churyumov–Gerasimenko and the solar wind

Koenders, C., Glassmeier, K.-H., Richter, I., Ranocha, H., Motschmann, U.

Journal:

Planetary and Space Science

Year:

2015

Language:

english

File:

PDF, 1.90 MB

english, 2015

5

Laccase Down-Regulation Causes Alterations in Phenolic Metabolism and Cell Wall Structure in Poplar

Journal:

PLANT PHYSIOLOGY

Year:

2002

Language:

english

File:

PDF, 984 KB

english, 2002

6

Laccase Down-Regulation Causes Alterations in Phenolic Metabolism and Cell Wall Structure in Poplar

Philippe Ranocha, Matthieu Chabannes, Simon Chamayou, Saïda Danoun , Alain Jauneau, Alain-M. Boudet and Deborah Goffner

Journal:

PLANT PHYSIOLOGY

Year:

2002

Language:

english

File:

PDF, 2.29 MB

english, 2002

7

Error Boundedness of Discontinuous Galerkin Methods with Variable Coefficients

Öffner, Philipp, Ranocha, Hendrik

Journal:

Journal of Scientific Computing

Year:

2019

Language:

english

File:

PDF, 1.44 MB

english, 2019

8

Discrete Vector Calculus and Helmholtz Hodge Decomposition for Classical Finite Difference Summation by Parts Operators

Ranocha, Hendrik, Ostaszewski, Katharina, Heinisch, Philip

Journal:

Communications on Applied Mathematics and Computation

Year:

2020

File:

PDF, 3.50 MB

2020

9

Identification of Specific Laccase Isoforms Capable of Polymerizing Monolignols by an “In-Gel” Procedure

Raja Sterjiades, Philippe Ranocha, Alain Michel Boudet, Deborah Goffner

Journal:

Analytical Biochemistry

Year:

1996

Language:

english

File:

PDF, 103 KB

english, 1996

10

The S-methylmethionine cycle in angiosperms: ubiquity, antiquity and activity

Philippe Ranocha, Scott D. McNeil, Michael J. Ziemak, Changjiang Li, Mitchell C. Tarczynski, Andrew D. Hanson

Journal:

The Plant Journal

Year:

2001

Language:

english

File:

PDF, 280 KB

english, 2001

11

WAT1 (WALLS ARE THIN1) defines a novel auxin transporter in plants and integrates auxin signaling in secondary wall formation in Arabidopsis fibers

Philippe Ranocha, Oana Dima, Judith Felten, Amandine Freydier, Laurent Hoffmann, Karin Ljung, Benoit Lacombe, Claire Corratgé, Jean-Baptiste Thibaud, Björn Sundberg, Wout Boerjan, Deborah Goffner

Journal:

BMC Proceedings

Year:

2011

Language:

english

File:

PDF, 89 KB

english, 2011

12

Multiple gene detection by in situ RT-PCR in isolated plant cells and tissues

Edouard Pesquet, Odile Barbier, Philippe Ranocha, Alain Jauneau, Deborah Goffner

Journal:

The Plant Journal

Year:

2004

Language:

english

File:

PDF, 1.39 MB

english, 2004

13

hca: an Arabidopsis mutant exhibiting unusual cambial activity and altered vascular patterning

Christophe Pineau, Amandine Freydier, Philippe Ranocha, Alain Jauneau, Simon Turner, Gaëtan Lemonnier, Jean-Pierre Renou, Petr Tarkowski, Göran Sandberg, Lise Jouanin, Björn Sundberg, Alain-Michel Bou

Journal:

The Plant Journal

Year:

2005

Language:

english

File:

PDF, 1.72 MB

english, 2005

14

Walls are thin 1 (WAT1), an Arabidopsis homolog of Medicago truncatula NODULIN21, is a tonoplast-localized protein required for secondary wall formation in fibers

Philippe Ranocha, Nicolas Denancé, Ruben Vanholme, Amandine Freydier, Yves Martinez, Laurent Hoffmann, Lothar Köhler, Cécile Pouzet, Jean-Pierre Renou, Björn Sundberg, Wout Boerjan, Deborah Goffner

Journal:

The Plant Journal

Year:

2010

Language:

english

File:

PDF, 788 KB

english, 2010

15

Biochemical characterization, molecular cloning and expression of laccases – a divergent gene family – in poplar

Philippe Ranocha, Gordon McDougall, Simon Hawkins, Raja Sterjiades, Gisèle Borderies, Derek Stewart, Marion Cabanes-Macheteau, Alain-M. Boudet, Deborah Goffner

Journal:

Year:

1999

Language:

english

File:

PDF, 724 KB

english, 1999

16

History and present situation of paediatric ENT surgery in Poland and in other Central East European countries

Mieczysław Chmielik, Anna Bielicka, Cezary Ranocha, Lechosław Chmielik

Journal:

International Congress Series

Year:

2003

Language:

english

File:

PDF, 45 KB

english, 2003

17

Deciphering the route ofRalstonia solanacearumcolonization inArabidopsis thalianaroots during a compatible interaction: focus at the plant cell wall

Catherine Digonnet, Yves Martinez, Nicolas Denancé, Marine Chasseray, Patrick Dabos, Philippe Ranocha, Yves Marco, Alain Jauneau, Deborah Goffner

Journal:

Year:

2012

Language:

english

File:

PDF, 1.36 MB

english, 2012

18

Arabidopsis wat1 ( walls are thin1 )-mediated resistance to the bacterial vascular pathogen, Ralstonia solanacearum , is accompanied by cross-regulation of salicylic acid and tryptophan metabolism

Denancé, Nicolas, Ranocha, Philippe, Oria, Nicolas, Barlet, Xavier, Rivière, Marie-Pierre, Yadeta, Koste A., Hoffmann, Laurent, Perreau, François, Clément, Gilles, Maia-Grondard, Alessandra, van den B

Journal:

The Plant Journal

Year:

2013

Language:

english

File:

PDF, 687 KB

english, 2013

19

Identification of a hydrogen peroxide signalling pathway in the control of light-dependent germination inArabidopsis

Lariguet, Patricia, Ranocha, Philippe, Meyer, Mireille, Barbier, Odile, Penel, Claude, Dunand, Christophe

Journal:

Year:

2013

Language:

english

File:

PDF, 640 KB

english, 2013

20

Expression of PRX36 , PMEI6 and SBT1.7 is controlled by complex transcription factor regulatory networks for proper seed coat mucilage extrusion

Ranocha, Philippe, Francoz, Edith, Burlat, Vincent, Dunand, Christophe

Journal:

Plant Signaling & Behavior

Year:

2014

Language:

english

File:

PDF, 331 KB

english, 2014

21

Characterization and Functional Expression of cDNAs Encoding Methionine-sensitive and -insensitive Homocysteine S-Methyltransferases from Arabidopsis

Journal:

Journal of Biological Chemistry

Year:

2000

Language:

english

File:

PDF, 971 KB

english, 2000

22

Cell Wall Modifications in Arabidopsis Plants with Altered -L-Arabinofuranosidase Activity

Chavez Montes, R. A., Ranocha, P., Martinez, Y., Minic, Z., Jouanin, L., Marquis, M., Saulnier, L., Fulton, L. M., Cobbett, C. S., Bitton, F., Renou, J.-P., Jauneau, A., Goffner, D.

Journal:

PLANT PHYSIOLOGY

Year:

2008

Language:

english

File:

PDF, 2.52 MB

english, 2008

23

Arabidopsis seed mucilage secretory cells: regulation and dynamics

Francoz, Edith, Ranocha, Philippe, Burlat, Vincent, Dunand, Christophe

Journal:

Trends in Plant Science

Year:

2015

Language:

english

File:

PDF, 2.65 MB

english, 2015

24

Galactoglucomannans Increase Cell Population Density and Alter the Protoxylem/Metaxylem Tracheary Element Ratio in Xylogenic Cultures of Zinnia

Benova-Kakosova, A., Digonnet, C., Goubet, F., Ranocha, P., Jauneau, A., Pesquet, E., Barbier, O., Zhang, Z., Capek, P., Dupree, P., Liskova, D., Goffner, D.

Journal:

PLANT PHYSIOLOGY

Year:

2006

Language:

english

File:

PDF, 739 KB

english, 2006

25

Arabidopsis WAT1 is a vacuolar auxin transport facilitator required for auxin homoeostasis

Ranocha, Philippe, Dima, Oana, Nagy, Réka, Felten, Judith, Corratgé-Faillie, Claire, Novák, Ondřej, Morreel, Kris, Lacombe, Benoît, Martinez, Yves, Pfrunder, Stephanie, Jin, Xu, Renou, Jean-Pierre, Th

Journal:

Nature Communications

Year:

2013

Language:

english

File:

PDF, 1.15 MB

english, 2013

26

Galactoglucomannans Increase Cell Population Density and Alter the Protoxylem/Metaxylem Tracheary Element Ratio in Xylogenic Cultures of Zinnia

Anna Beňová-Kákošová, Catherine Digonnet, Florence Goubet, Philippe Ranocha, Alain Jauneau, Edouard Pesquet, Odile Barbier, Zhinong Zhang, Peter Capek, Paul Dupree, Desana Lišková and Deborah Goffner

Journal:

PLANT PHYSIOLOGY

Year:

2006

Language:

english

File:

PDF, 3.41 MB

english, 2006

27

Cell Wall Modifications in Arabidopsis Plants with Altered α-l-Arabinofuranosidase Activity

Ricardo A. Chávez Montes, Philippe Ranocha, Yves Martinez, Zoran Minic, Lise Jouanin, Mélanie Marquis, Luc Saulnier, Lynette M. Fulton, Christopher S. Cobbett, Frédérique Bitton, Jean-Pierre Renou, Al

Journal:

PLANT PHYSIOLOGY

Year:

2008

Language:

english

File:

PDF, 3.47 MB

english, 2008

28

Summation-by-parts operators for correction procedure via reconstruction

Ranocha, Hendrik, Öffner, Philipp, Sonar, Thomas

Journal:

Journal of Computational Physics

Year:

2016

Language:

english

File:

PDF, 1.94 MB

english, 2016

29

Insertional Inactivation of the Methionine S-Methyltransferase Gene Eliminates the S-Methylmethionine Cycle and Increases the Methylation Ratio

Michael G. Kocsis, Philippe Ranocha, Douglas A. Gage, Eric S. Simon, David Rhodes, Gregory J. Peel, Stefan Mellema, Kazuki Saito, Motoko Awazuhara, Changjiang Li, Robert B. Meeley, Mitchell C. Tarczyn

Journal:

PLANT PHYSIOLOGY

Year:

2003

Language:

english

File:

PDF, 1.31 MB

english, 2003

30

Methods for calculating stationary distribution in linear models of time series

Anděl, J., Netuka, I., Ranocha, P.

Journal:

Year:

2007

Language:

english

File:

PDF, 288 KB

english, 2007

31

Light-regulated compensation of wat1 ( walls are thin1 ) growth and secondary cell wall phenotypes is auxin-independent

Denancé, Nicolas, Ranocha, Philippe, Martinez, Yves, Sundberg, Björn, Goffner, Deborah

Journal:

Plant Signaling & Behavior

Year:

2010

Language:

english

File:

PDF, 657 KB

english, 2010

32

The Arabidopsis thaliana Class III Peroxidase AtPRX71 Negatively Regulates Growth under Physiological Conditions and in Response to Cell Wall Damage.

Raggi, Sara, Ferrarini, Alberto, Delledonne, Massimo, Dunand, Christophe, Ranocha, Philippe, De Lorenzo, Giulia, Cervone, Felice, Ferrari, Simone

Journal:

PLANT PHYSIOLOGY

Year:

2015

Language:

english

File:

PDF, 1.28 MB

english, 2015

33

High-throughput microanalysis of large lignocellulosic sample sets by pyrolysis-gas chromatography/mass spectrometry

Gerber, Lorenz, Öhman, David, Kumar, Manoj, Ranocha, Philippe, Goffner, Deborah, Sundberg, Björn

Journal:

Physiologia Plantarum

Year:

2016

Language:

english

File:

PDF, 338 KB

english, 2016

34

The class III peroxidase PRX17 is a direct target of the MADS-box transcription factor AGAMOUS-LIKE15 (AGL15) and participates in lignified tissue formation

Cosio, Claudia, Ranocha, Philippe, Francoz, Edith, Burlat, Vincent, Zheng, Yumei, Perry, Sharyn E., Ripoll, Juan-Jose, Yanofsky, Martin, Dunand, Christophe

Journal:

New Phytologist

Year:

2016

Language:

english

File:

PDF, 1.69 MB

english, 2016

35

Novel Markers of Xylogenesis in Zinnia Are Differentially Regulated by Auxin and Cytokinin

Edouard Pesquet, Philippe Ranocha, Sylvain Legay, Catherine Digonnet, Odile Barbier, Magalie Pichon and Deborah Goffner

Journal:

PLANT PHYSIOLOGY

Year:

2005

Language:

english

File:

PDF, 4.07 MB

english, 2005

36

Complementarity of medium-throughput in situ RNA hybridization and tissue-specific transcriptomics: case study of Arabidopsis seed development kinetics

Francoz, Edith, Ranocha, Philippe, Pernot, Clémentine, Ru, Aurélie Le, Pacquit, Valérie, Dunand, Christophe, Burlat, Vincent

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.92 MB

english, 2016

37

Shallow water equations: split-form, entropy stable, well-balanced, and positivity preserving numerical methods

Ranocha, Hendrik

Journal:

GEM - International Journal on Geomathematics

Year:

2017

Language:

english

File:

PDF, 1.77 MB

english, 2017

38

Molecular link between auxin and ROS-mediated polar growth

Mangano, Silvina, Denita-Juarez, Silvina Paola, Choi, Hee-Seung, Marzol, Eliana, Hwang, Youra, Ranocha, Philippe, Velasquez, Silvia Melina, Borassi, Cecilia, Barberini, María Laura, Aptekmann, Ariel A

Journal:

Proceedings of the National Academy of Sciences

Year:

2017

Language:

english

File:

PDF, 991 KB

english, 2017

39

Cell wall modifications of two Arabidopsis thaliana ecotypes, Col and Sha, in response to sub-optimal growth conditions: An integrative study

Duruflé, Harold, Hervé, Vincent, Ranocha, Philippe, Balliau, Thierry, Zivy, Michel, Chourré, Josiane, San Clemente, Hélène, Burlat, Vincent, Albenne, Cécile, Déjean, Sébastien, Jamet, Elisabeth, Dunan

Journal:

Year:

2017

Language:

english

File:

PDF, 746 KB

english, 2017

40

$$L_2$$ L 2 Stability of Explicit Runge–Kutta Schemes

Ranocha, Hendrik, Öffner, Philipp

Journal:

Journal of Scientific Computing

Year:

2017

Language:

english

File:

PDF, 701 KB

english, 2017

41

Comparison of Some Entropy Conservative Numerical Fluxes for the Euler Equations

Ranocha, Hendrik

Journal:

Journal of Scientific Computing

Year:

2017

Language:

english

File:

PDF, 684 KB

english, 2017

42

Stability of artificial dissipation and modal filtering for flux reconstruction schemes using summation-by-parts operators

Ranocha, Hendrik, Glaubitz, Jan, Öffner, Philipp, Sonar, Thomas

Journal:

Applied Numerical Mathematics

Year:

2018

Language:

english

File:

PDF, 1.32 MB

english, 2018

43

Generalised summation-by-parts operators and variable coefficients

Ranocha, Hendrik

Journal:

Journal of Computational Physics

Year:

2018

Language:

english

File:

PDF, 1.37 MB

english, 2018

44

[ACM Press the International Workshop - Oxford, United Kingdom (2018.05.14-2018.05.16)] Proceedings of the International Workshop on OpenCL - IWOCL '18 - Advantages and pitfalls of OpenCL in computational physics

Ostaszewski, Katharina, Heinisch, Philip, Ranocha, Hendrik

Year:

2018

Language:

english

File:

PDF, 291 KB

english, 2018

45

Mimetic properties of difference operators: product and chain rules as for functions of bounded variation and entropy stability of second derivatives

Ranocha, Hendrik

Journal:

BIT Numerical Mathematics

Year:

2018

Language:

english

File:

PDF, 523 KB

english, 2018

46

Pectin Demethylesterification Generates Platforms that Anchor Peroxidases to Remodel Plant Cell Wall Domains

Francoz, Edith, Ranocha, Philippe, Le Ru, Aurélie, Martinez, Yves, Fourquaux, Isabelle, Jauneau, Alain, Dunand, Christophe, Burlat, Vincent

Journal:

Developmental Cell

Year:

2018

Language:

english

File:

PDF, 7.15 MB

english, 2018

47

Stability of correction procedure via reconstruction with summation-by-parts operators for Burgers' equation using a polynomial chaos approach

Öffner, Philipp, Glaubitz, Jan, Ranocha, Hendrik

Journal:

ESAIM Mathematical Modelling and Numerical Analysis

Year:

2018

File:

PDF, 1.23 MB

2018

48

Stability of correction procedure via reconstruction with summation-by-parts operators for Burgers' equation using a polynomial chaos approach

Öffner, Philipp, Glaubitz, Jan, Ranocha, Hendrik

Journal:

ESAIM Mathematical Modelling and Numerical Analysis

Year:

2018

Language:

english

File:

PDF, 1.23 MB

english, 2018

49

Phenotypic Trait Variation as a Response to Altitude-Related Constraints in Arabidopsis Populations

Duruflé, Harold, Ranocha, Philippe, Mbadinga Mbadinga, Duchesse Lacour, Déjean, Sébastien, Bonhomme, Maxime, San Clemente, Hélène, Viudes, Sébastien, Eljebbawi, Ali, Delorme-Hinoux, Valerie, Sáez-Vásq

Journal:

Frontiers in Plant Science

Year:

2019

File:

PDF, 3.06 MB

2019

50

Some notes on summation by parts time integration methods

Ranocha, Hendrik

Journal:

Results in Applied Mathematics

Year:

2019

File:

PDF, 233 KB

2019